Nucleic Acids Research · 2006 · 32 citations · 11 references
Life SciencesBioinformaticsGeneticsGenomic Data AnalysisGenomic InformaticsGenomicsAnnotationGenome AnnotationGenome VisualizationGenomic Data VisualizationGenomic DatabasesSequence AnnotationAssociation Rule MiningCurated Genome DatabasesCustomizationGenome Annotation DatabasesGraphical User InterfacesNavigationWeb Server ArchitectureWeb Services
The PEDANT genome database provides exhaustive annotation of 468 genomes by a broad set of bioinformatics algorithms. We describe recent developments of the PEDANT Web server. The all-new Graphical User Interface (GUI) implemented in Javatrade mark allows for more efficient navigation of the genome data, extended search capabilities, user customization and export facilities. The DNA and Protein viewers have been made highly dynamic and customizable. We also provide Web Services to access the entire body of PEDANT data programmatically. Finally, we report on the application of association rule mining for automatic detection of potential annotation errors. PEDANT is freely accessible to academic users at http://pedant.gsf.de.
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Fast algorithms for mining association rules
Rakesh Agrawal, Ramakrishnan Srikant · 1998 · 10.8K citations
The Universal Protein Resource (UniProt)
Amos Bairoch · Nucleic Acids Research · 2004 · 3.8K citations · Full text
The Universal Protein Resource (UniProt)
Nucleic Acids Research · 2006 · 573 citations · Full text
Functional and structural genomics using PEDANT
Dmitrij Frishman, Kaj Albermann, Jean Hani et al. · Bioinformatics · 2001 · 197 citations