Concepedia

Probing 3′-ssDNA Loop Formation in E. coli RecBCD/RecBC–DNA Complexes Using Non-natural DNA: A Model for “Chi” Recognition Complexes

C. Jason Wong, Rachel L. Rice, Nathan Baker, Tao Ju, Timothy M. Lohman

Journal of Molecular Biology · 2006 · 26 citations · 50 references

DOI

Concepts

References

50

A Second Generation Force Field for the Simulation of Proteins, Nucleic Acids, and Organic Molecules

Wendy D. Cornell, Piotr Cieplak, Christopher I. Bayly et al. · Journal of the American Chemical Society · 1995 · 13.1K citations

, , +17

Electrostatics of nanosystems: Application to microtubules and the ribosome

Nathan Baker, David Sept, Simpson Joseph et al. · Proceedings of the National Academy of Sciences · 2001 · 7.3K citations · Full text

, , +16

PDB2PQR: an automated pipeline for the setup of Poisson-Boltzmann electrostatics calculations

T. J. Dolinsky, Jens Erik Nielsen, J. Andrew McCammon et al. · Nucleic Acids Research · 2004 · 3.6K citations · Full text

, , +17

Exploring protein native states and large‐scale conformational changes with a modified generalized born model

Alexey V. Onufriev, Donald Bashford, David A. Case · Proteins Structure Function and Bioinformatics · 2004 · 2.5K citations

, , +17

Very fast empirical prediction and rationalization of protein pK<sub>a</sub> values

Hui Li, Andrew D. Robertson, Jan H. Jensen · Proteins Structure Function and Bioinformatics · 2005 · 2.1K citations

, , +13