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CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice

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The neighbor-joining method: a new method for reconstructing phylogenetic trees.

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A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences

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Daniel H. Huson, David Bryant · Molecular Biology and Evolution · 2005 · 8.9K citations · Full text

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