Journal of Heredity · 2005 · 34 citations · 36 references
Life SciencesGeneticsMolecular GeneticsComparative GenomicsMolecular EvolutionPhylogeneticsEvolutionary RelationshipsFish Comparative GenomicsFish GenomicsGenetics Of Marine FishesPhylogenetic GeneticsVertebrate EvolutionComparative Genome OrganizationEvolutionarily Conserved RegionsEvolutionary Genomics Of FishExon-intron BoundariesFish Genome EvolutionFish PhylogenyMarine Fish PhylogeneticsVertebrate Phylogeny
The Sox9 gene of Acipenser sturio, one of the most primitive vertebrates, was analyzed. No sex-specific differences were observed. Sturgeon Sox9 consists of three exons and two introns with completely conserved exon-intron boundaries showing high levels of homology to other vertebrate Sox9 sequences, especially in the N-terminus region containing the HMG box. We found strong evidence for negative (purifying) selection. In contrast to previous studies of other fishes, we observed no evidence for gene duplication in sturgeon. Phylogenetic analyses of Sox9 evolution revealed a basal position for sturgeon Sox9.
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MODELTEST: testing the model of DNA substitution.
David Posada, Keith A. Crandall · Bioinformatics · 1998 · 20.1K citations
MEGA2: molecular evolutionary genetics analysis software
Sudhir Kumar, Koichiro Tamura, Ingrid B. Jakobsen et al. · Bioinformatics · 2001 · 6.1K citations · Full text