Widespread intron retention diversifies most cancer transcriptomes

References

Page 1

	Year	Citations
RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome Bo Li, Colin N. Dewey BMC Bioinformatics	2011	22.5K
Ultrafast and memory-efficient alignment of short DNA sequences to the human genome Ben Langmead, Cole Trapnell, Mihai Pop, Genome biology	2009	22.5K
TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions Daehwan Kim, Geo Pertea, Cole Trapnell, Genome biology BioinformaticsGene Sequence AnnotationNatural SciencesGeneticsSequence Analysis	2013	13.4K
Evaluation of Factors Related to Late Recurrence - Later than 10 Years after the Initial Treatment - in Primary Breast Cancer Reiki Nishimura, Tomofumi Osako, Yasuyuki Nishiyama, Oncology	2013	13.2K
Comprehensive molecular portraits of human breast tumours Nature Breast OncologyComprehensive Molecular PortraitsTumor HeterogeneityPathologyBreast Cancer	2012	12.1K
Gene expression patterns of breast carcinomas distinguish tumor subclasses with clinical implications Thérese Sørlie, Charles M. Perou, Robert Tibshirani, Proceedings of the National Academy of Sciences	2001	10.8K
A scaling normalization method for differential expression analysis of RNA-seq data Mark D. Robinson, Alicia Oshlack Genome biology	2010	8.2K
Gene ontology analysis for RNA-seq: accounting for selection bias Matthew D. Young, Matthew J. Wakefield, Gordon K. Smyth, Genome biology	2010	7.6K
Fast Stable Restricted Maximum Likelihood and Marginal Likelihood Estimation of Semiparametric Generalized Linear Models Simon N. Wood Journal of the Royal Statistical Society Series B (Statistical Methodology) Parameter EstimationEngineeringApproximate RemlRobust ModelingRobust Statistic	2010	7.2K
Landscape of transcription in human cells Sarah Djebali, Carrie Davis, Angelika Merkel, Nature	2012	5.3K

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