Concepedia

JaDis: computing distances between nucleic acid sequences.

I Gonçalves, G Perrière, D Mouchiroud

Bioinformatics · 1999 · 21 citations · 7 references

DOIFull text

Open access

Concepts

Abstract

SUMMARY: JaDis is a Java application for computing evolutionary distances between nucleic acid sequences and G+C base frequencies. It allows specific comparison of coding sequences, of non-coding sequences or of a non-coding sequence with coding sequences. AVAILABILITY: http://pbil.univ-lyon1.fr/software/jadis.html

References

7

A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences

Journal of Molecular Evolution · 1980 · 29.8K citations

, , +15

PHYLIP-Phylogeny inference package (Version 3.2)

Joe Felsenstein · Cladistics · 1989 · 17.9K citations

, , +9

Estimation of the number of nucleotide substitutions in the control region of mitochondrial DNA in humans and chimpanzees.

Koichiro Tamura, M Nei · Molecular Biology and Evolution · 1993 · 11.4K citations · Full text

, , +16

SEAVIEW and PHYLO_WIN: two graphic tools for sequence alignment and molecular phylogeny

Nicolas Galtier, Manolo Gouy, Christian Gautier · Computer applications in the biosciences · 1996 · 2.2K citations

, , +17

Inferring phylogenies from DNA sequences of unequal base compositions.

Nicolas Galtier, Manolo Gouy · Proceedings of the National Academy of Sciences · 1995 · 246 citations

, , +17