IEEE Transactions on Neural Networks and Learning Systems · 2013 · 32 citations · 17 references
BusinessBioinformaticsComputational BiologyComputational NeuroscienceMachine LearningDimensionality ReductionDocument ClusteringText ClusteringCluster SetsClusteringDendrogram AnalysisDendrogramsEquivalence Relation RepresentationHierarchical Cluster AnalysisHierarchical Clustering
The existence of multiple solutions in clustering, and in hierarchical clustering in particular, is often ignored in practical applications. However, this is a non-trivial problem, as different data orderings can result in different cluster sets that, in turns, may lead to different interpretations of the same data. The method presented here offers a solution to this issue. It is based on the definition of an equivalence relation over dendrograms that allows developing all and only the significantly different dendrograms for the same dataset, thus reducing the computational complexity to polynomial from the exponential obtained when all possible dendrograms are considered. Experimental results in the neuroimaging and bioinformatics domains show the effectiveness of the proposed method.
17
Gene Ontology: tool for the unification of biology
Michael Ashburner, Catherine A. Ball, Judith A. Blake et al. · Nature Genetics · 2000 · 44.6K citations · Full text
Optimization by Simulated Annealing
Scott Kirkpatrick, C. D. Gelatt, M.P. Vecchi · Science · 1983 · 44.6K citations
A tutorial on spectral clustering
Ulrike von Luxburg · Statistics and Computing · 2007 · 10.3K citations · Full text
Data clustering: 50 years beyond K-means
Anil K. Jain · Pattern Recognition Letters · 2009 · 9.2K citations