Science · 1996 · 329 citations · 44 references
Life SciencesGeneticsMolecular BiologyGenomicsMolecular VirologyVirologyHost-virus InteractionsOncogenic VirusesViral GeneticsViral GenomicsViral InfectionsVirus-host InteractionsAcquired Immunodeficiency SyndromeHost Defense ResponsesImmune Evasion By Oncogenic VirusesOncogenic Virus BiologyPoxvirus BiologyViral ImmunogenomicsWhole-genome Sequence Analysis
Molluscum contagiosum virus (MCV) commonly causes asymptomatic cutaneous neoplasms in children and sexually active adults as well as persistent opportunistic acquired immunodeficiency syndrome (AIDS)-associated disease. Sequencing the 190-kilobase pair genome of MCV has now revealed that the virus potentially encodes 163 proteins, of which 103 have homologs in the smallpox virus. MCV lacks counterparts to 83 genes of the smallpox virus, including those important in suppression of host responses to infection, nucleotide biosynthesis, and cell proliferation. MCV possesses 59 genes that are predicted to encode previously uncharacterized proteins, including major histocompatibility complex class I, chemokine, and glutathione peroxidase homologs, which suggests that there are MCV-specific strategies for coexistence with the human host.
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Basic local alignment search tool
Stephen F. Altschul, Warren Gish, Webb Miller et al. · Journal of Molecular Biology · 1990 · 94.5K citations
Optimal alignments in linear space
Eugene W. Myers, Webb Miller · Computer applications in the biosciences · 1988 · 1.2K citations