Concepedia

Into the deep: A phylogenetic approach to the bivalve subclass Protobranchia

Prashant P. Sharma, John D. Zardus, Elizabeth E. Boyle, Vanessa L. González, Robert M. Jennings, Erin McIntyre, Ward C. Wheeler, Ron J. Etter, Gonzalo Giribet

Molecular Phylogenetics and Evolution · 2013 · 95 citations · 85 references

DOI

Concepts

References

85

MUSCLE: multiple sequence alignment with high accuracy and high throughput

R. C. Edgar · Nucleic Acids Research · 2004 · 46.5K citations · Full text

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A Simple, Fast, and Accurate Algorithm to Estimate Large Phylogenies by Maximum Likelihood

Stéphane Guindon, Olivier Gascuel · Systematic Biology · 2003 · 17K citations · Full text

, , +17

RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models

Alexandros Stamatakis · Bioinformatics · 2006 · 15.9K citations · Full text

, , +17

BEAST: Bayesian evolutionary analysis by sampling trees

Alexei J. Drummond, Andrew Rambaut · BMC Evolutionary Biology · 2007 · 13.1K citations · Full text

, , +16

Selection of Conserved Blocks from Multiple Alignments for Their Use in Phylogenetic Analysis

José Castresana · Molecular Biology and Evolution · 2000 · 10.8K citations · Full text

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