Journal of Virology · 2004 · 335 citations · 36 references
Life SciencesMolecular BiologyZoologyHerpetologyMolecular VirologyVirologyDna SequencingDna Virus BiologyMolecular PhylogenyPolymerase Chain ReactionReptile BiologyVirus ClassificationAdenovirus BiologyAdenovirus DetectionAdenoviruses In WildlifeBlue TonguePhylogenetic Character AnalysisPhylogenetic Virus ClassificationPolymerase Chain Reaction (Pcr) AssaysReptile Virology
A consensus nested-PCR method was designed for investigation of the DNA polymerase gene of adenoviruses. Gene fragments were amplified and sequenced from six novel adenoviruses from seven lizard species, including four species from which adenoviruses had not previously been reported. Host species included Gila monster, leopard gecko, fat-tail gecko, blue-tongued skink, Tokay gecko, bearded dragon, and mountain chameleon. This is the first sequence information from lizard adenoviruses. Phylogenetic analysis indicated that these viruses belong to the genus Atadenovirus, supporting the reptilian origin of atadenoviruses. This PCR method may be useful for obtaining templates for initial sequencing of novel adenoviruses.
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CONFIDENCE LIMITS ON PHYLOGENIES: AN APPROACH USING THE BOOTSTRAP
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Multiple sequence alignment with hierarchical clustering
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