Journal of Bacteriology · 2011 · 69 citations · 10 references
Life SciencesInfectious DiseasesMicrobiologyBacteriologyGenomicsMicrobial GenomicsAntibiotic ResistanceAntibiotic Resistance GeneticsAntimicrobial Resistance GenomicsDna SequencingGenome SequencingPathogen GenomicsAcinetobacter Baumannii InfectionAcinetobacter Baumannii ResistanceAntimicrobial Resistance Gene DetectionBacterial Genome AssemblyComparative Genomics Of ResistancePaired-end SequencingPathogen Genome SequencingPathogenic Determinants
Acinetobacter baumannii is a pathogenic species of bacteria, identified as an aerobic gram-negative bacterium, that is resistant to most antibiotics. In this study, the MDR-TJ strain was isolated at the Second Hospital of Tianjin Medical University, China, and was found to be resistant to penicillin, cephalosporins, aminoglycosides, quinolones, and also imipenem. The genome sequence of Acinetobacter baumannii strain MDR-TJ was determined by using a combination of 454 pyrosequencing and paired-end sequencing performed with the Roche Genome Sequencer FLX system to generate a scaffolded assembly.
10
The RAST Server: Rapid Annotations using Subsystems Technology
Ramy K. Aziz, Daniela Bartels, Aaron A. Best et al. · BMC Genomics · 2008 · 11.8K citations · Full text
RNAmmer: consistent and rapid annotation of ribosomal RNA genes
Karin Lagesen, Peter F. Hallin, Einar Andreas Rødland et al. · Nucleic Acids Research · 2007 · 6.3K citations · Full text
Identifying bacterial genes and endosymbiont DNA with Glimmer
Arthur L. Delcher, Kirsten A. Bratke, Edwin C. Powers et al. · Bioinformatics · 2007 · 3.2K citations · Full text