FEBS Letters · 2015 · 39 citations · 37 references
Life SciencesBiochemistryMicrobiologyEnzymologyMetabolismMicrobial MetabolismMarine Microbial MetabolismPentose Phosphate PathwayMicrobial Pentose Phosphate Pathway
The oxidative pentose phosphate pathway (OPPP), catalyzing the oxidation of glucose-6-phosphate to ribulose-5-phosphate is ubiquitous in eukarya and bacteria but has not yet been reported in archaea. In haloarchaea a putative 6-phosphogluconate dehydrogenase (6PGDH) is annotated, whereas a gene coding for glucose-6-phosphate dehydrogenase (Glc6PDH) could not be identified. Here we report the purification and characterization of a novel type of Glc6PDH in Haloferax volcanii that is not related to bacterial and eukaryal Glc6PDHs and the encoding gene is designated as azf (archaeal zwischenferment). Further, recombinant H. volcanii 6PGDH was characterized. Deletion mutant analyses indicate that both, Glc6PDH and 6PGDH, are functionally involved in pentose phosphate formation in vivo. This is the first report on the operation of the OPPP in the domain of archaea.
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CDD: a Conserved Domain Database for the functional annotation of proteins
Aron Marchler‐Bauer, Shuo Lu, J. B. Anderson et al. · Nucleic Acids Research · 2010 · 3.2K citations · Full text
ESPript: analysis of multiple sequence alignments in PostScript.
Patrice Gouet, Emmanuel Courcelle, David I. Stuart et al. · Bioinformatics · 1999 · 2.9K citations · Full text