Interactively optimizing signal-to-noise ratios in expression profiling: project-specific algorithm selection and detection <i>p</i>-value weighting in Affymetrix microarrays

Abstract

The Hierarchical Clustering Explorer 2.0 is available at http://www.cs.umd.edu/hcil/hce/ Murine arrays (40 samples) are publicly available at the PEPR resource (http://microarray.cnmcresearch.org/pgadatatable.asp http://pepr.cnmcresearch.org Chen et al., 2004).