PLoS Medicine · 2005 · 208 citations · 45 references
MedicineGeneticsOncologyCarcinogenesisMitochondrial BiologyMitochondrial GeneticsMitochondrial Genome VariationNext-generation Sequencing In OncologyMitochondrial Dna PhylogenyMitochondrial Dna Sequence VariationMitochondrial Dna VariationMitochondrial Genome SequencingMitochondrial GenomicsResearch JournalsSomatic Mutations
BACKGROUND: Mitochondrial DNA (mtDNA) is being analyzed by an increasing number of laboratories in order to investigate its potential role as an active marker of tumorigenesis in various types of cancer. Here we question the conclusions drawn in most of these investigations, especially those published in high-rank cancer research journals, under the evidence that a significant number of these medical mtDNA studies are based on obviously flawed sequencing results. METHODS AND FINDINGS: In our analyses, we take a phylogenetic approach and employ thorough database searches, which together have proven successful for detecting erroneous sequences in the fields of human population genetics and forensics. Apart from conceptual problems concerning the interpretation of mtDNA variation in tumorigenesis, in most cases, blocks of seemingly somatic mutations clearly point to contamination or sample mix-up and, therefore, have nothing to do with tumorigenesis. CONCLUSION: The role of mitochondria in tumorigenesis remains unclarified. Our findings of laboratory errors in many contributions would represent only the tip of the iceberg since most published studies do not provide the raw sequence data for inspection, thus hindering a posteriori evaluation of the results. There is no precedent for such a concatenation of errors and misconceptions affecting a whole subfield of medical research.
45
Sequence and organization of the human mitochondrial genome
Stephen K. Anderson, Alan T. Bankier, B. G. Barrell et al. · Nature · 1981 · 9.7K citations
Mitochondrial genome variation and the origin of modern humans
Max Ingman, Henrik Kaessmann, Svante Pääbo et al. · Nature · 2000 · 1.6K citations
Somatic mutations of the mitochondrial genome in human colorectal tumours
Kornélia Polyák, Yunbo Li, Hong Zhu et al. · Nature Genetics · 1998 · 838 citations
Facile Detection of Mitochondrial DNA Mutations in Tumors and Bodily Fluids
Makiko Fliss, Henning Usadel, Otávia L. Caballero et al. · Science · 2000 · 823 citations