Proceedings of the National Academy of Sciences · 2006 · 35 citations · 14 references
Life SciencesBiophysicsCell BiologyCell BiophysicsCell SignalingSignal TransductionBiophysical KineticsCalcium SignalingCell Signaling BiophysicsIntracellular CommunicationTime-dependent TransportTransport In CellsCell Signaling PathwaysDiffusion CoefficientsEffective Diffusion CoefficientFluorescence Recovery After PhotobleachingLocal Signal DiffusionParticle DiffusionSignal PropagationSignal Propagation Dynamics
In many cell-signaling pathways, information is transmitted by the diffusion of messenger molecules. Diffusion coefficients characterize the messenger's spatial range and the characteristic times of signal propagation. Inside cells, particles usually diffuse in the presence of immobile binding sites (or traps). It is well known that binding to traps results in an effective diffusion coefficient that is smaller than the free coefficient in media free of traps. To measure effective diffusion coefficients in cells, "tagged" particles are often used. Radioactive calcium was used in a giant squid axon and in cytosolic extracts of Xenopus laevis oocytes. Fluorescence recovery after photobleaching yields diffusion coefficients from observations of the distribution of fluorescently labeled proteins. In the absence of traps, free diffusion coefficients give both the rate at which single-particle mean square displacements increase and the rate at which information in the form of inhomogeneities in particle concentration spread out with time. We show here that, in the presence of traps, information diffuses faster than single particles. Thus, messages diffuse faster than messengers. Tagged-particle experiments give the single-particle diffusion coefficients and, thus, can underestimate the rate of diffusive signal propagation.
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Mobility measurement by analysis of fluorescence photobleaching recovery kinetics
Daniel Axelrod, D E Koppel, Joseph Schlessinger et al. · Biophysical Journal · 1976 · 2.7K citations · Full text
Movements of labelled calcium in squid giant axons
A. L. Hodgkin, R. D. Keynes · The Journal of Physiology · 1957 · 664 citations
Analysis of Binding Reactions by Fluorescence Recovery after Photobleaching
Brian L. Sprague, Robert L. Pego, Diana A. Stavreva et al. · Biophysical Journal · 2004 · 629 citations · Full text