Concepedia

mProphet: automated data processing and statistical validation for large-scale SRM experiments

Lukas Reiter, Oliver Rinner, Paola Picotti, Ruth Hüttenhain, Martin Beck, Mi‐Youn Brusniak, Michael O. Hengartner, Ruedi Aebersold

Nature Methods · 2011 · 566 citations · 33 references

DOI

Concepts

References

33

Statistical significance for genomewide studies

John D. Storey, Robert Tibshirani · Proceedings of the National Academy of Sciences · 2003 · 10.1K citations · Full text

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Stable Isotope Labeling by Amino Acids in Cell Culture, SILAC, as a Simple and Accurate Approach to Expression Proteomics

Shao‐En Ong, Blagoy Blagoev, Irina Kratchmarova et al. · Molecular & Cellular Proteomics · 2002 · 5.6K citations · Full text

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Empirical Statistical Model To Estimate the Accuracy of Peptide Identifications Made by MS/MS and Database Search

Andrew Keller, Alexey I. Nesvizhskii, Eugene Kolker et al. · Analytical Chemistry · 2002 · 5K citations

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A Statistical Model for Identifying Proteins by Tandem Mass Spectrometry

Alexey I. Nesvizhskii, Andrew Keller, Eugene Kolker et al. · Analytical Chemistry · 2003 · 5K citations

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Skyline: an open source document editor for creating and analyzing targeted proteomics experiments

Brendan MacLean, Daniela M. Tomazela, Nicholas Shulman et al. · Bioinformatics · 2010 · 5K citations · Full text

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