AIDS Research and Human Retroviruses · 1996 · 31 citations · 8 references
Life SciencesGeneticsMolecular GeneticsMolecular EpidemiologyMolecular VirologyVirologyHiv DiagnosisHiv EpidemiologyMolecular TypingViral GeneticsViral GenomicsVirus ClassificationGenetic Heterogeneity AnalysisHiv Nucleic Acid TestingPhylogenetic Character AnalysisPhylogenetic Diversity AnalysisSubtype DiscoverySubtype PolymorphismViral Strain Typing
HIV-genetic subtypes were analyzed in 130 subjects from the Russian Federation, by the HMA technique. Six subtypes were identified in heterosexuals, including A, B, C, D, G, and H; however, homosexual men were infected predominantly with the B subtype (33 of 35). The subtype A isolates were found in population of intravenous drug users. HMA successfully identifies 128/130 DNA samples; the phylogenetic analysis of the V1/V5 gp120 encoding region derived from another two samples demonstrated that these isolate belong to subtype H.
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PHYLIP-Phylogeny inference package (Version 3.2)
Joe Felsenstein · Cladistics · 1989 · 17.9K citations
Carla Kuiken, Gabriël Zwart, Elly Baan et al. · Proceedings of the National Academy of Sciences · 1993 · 104 citations