Altered patterns of soil carbon substrate usage and heterotrophic respiration in a pine forest with elevated CO₂and N fertilization

Abstract

Abstract To assess how heterotrophic microorganisms may alter their activities and thus their CO 2 ‐C return to the atmosphere with elevated CO 2 and changing N availability, we examined soil organic matter (SOM) dynamics at the Duke Free Air Carbon Enrichment (FACE) site, after N fertilizer was applied. We measured heterotrophic respiration during early and late stages of SOM mineralization in soil incubations to capture activity on relatively labile and refractory SOM pools. We also measured δ 13 C of respired CO 2 ‐C and phospholipid fatty acids (PLFAs) during early mineralization stages to track the microbial groups involved in substrate use. We calculated , a measure of δ 13 C PLFA normalized by respired δ 13 CO 2 , to assess microbial function with C substrates formed with elevated CO 2 and altered N availability, via the distinct δ 13 C of the supplemental CO 2 . We also quantified extracellular enzyme activity (EEA) during labile and recalcitrant SOM mineralization. Early in the incubations, increased N availability reduced heterotrophic CO 2 ‐C release. By the later stages of SOM mineralization, elevated CO 2 soils with fertilization had respired 72% of the CO 2 ‐C respired by all other soils. values suggest that fungi in elevated CO 2 plots took up C substrates possessing the δ 13 C signature of recently formed SOM, and added N promoted the activity of Gram‐negative bacteria and reduced that of Gram‐positive bacteria, particularly actinomycetes. Consistent with this, the enzyme responsible for the degradation of peptidoglycan and chitin, compounds produced by Gram‐positive bacteria and fungi, respectively, experienced a decline in activity with N fertilization. If patterns observed in this study with N additions are reversed with progressive N limitation at this site, actinomycetes and other Gram‐positive bacteria responsible for mineralizing relatively recalcitrant substrates may experience increases in their activity. Such shifts in microbial functioning may result in increased turnover of, and C release from, relatively decay‐resistant material.