Stereochemical criteria for polypeptides and proteins. V. Conformation of a system of three linked peptide units
Biopolymers · 1968 · 1.5K citations · 12 references
The study investigates the general conformations of a tripeptide system, identifying three distinct conformations featuring NH…O hydrogen bonding between the first and third units. The authors map these tripeptide conformations onto a (ϕ,ψ) diagram to represent their spatial arrangements. They find one conformation corresponds to a 310‑helix, while the other two are nonhelical, similar in shape, involve a chain reversal, and can occur in polypeptide back‑folding regions such as cross‑β structures, with examples in cyclohexaglyeyl, an open tetrapeptide, and lysozyme.
The general conformations of a system of three linked peptide units are studied, and it is found that there are three types of conformations which contain NH…O hydrogen bonding between the first and the third units. One of them is part of a 310-helix, while the other two arc nonhelical. The two nonhelical conformations are very similar, and in both the cases the peptide chain turns around, reversing the direction of progress. Such a conformation can therefore occur in the region where a polypeptide chain folds back on itself, as in the cross-β structure. The method of representing these interesting tripeptide conformations in a (ϕ,ψ) map is described. Examples of such hydrogen-bonded, nonhelical conformations which occur in peptides and proteins are discussed—e.g., in cyclohexaglyeyl, an open tetrapeptide Gly-L-Pro-L-Leu-Gly, and in parts of the lysozyme chain.
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Stereochemistry of polypeptide chain configurations
G. N. Ramachandran, C. Ramakrishnan, V. Sasisekharan · Journal of Molecular Biology · 1963
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Structure of Hen Egg-White Lysozyme: A Three-dimensional Fourier Synthesis at 2 Å Resolution
C. C. F. Blake, D. F. Koenig, G. A. Mair et al. · Nature · 1965
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Stereochemical Criteria for Polypeptide and Protein Chain Conformations
C. Ramakrishnan, G. N. Ramachandran · Biophysical Journal · 1965
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On the conformation of the hen egg-white lysozyme molecule
C. C. F. Blake, G. A. Mair, A.C.T. North et al. · Proceedings of the Royal Society of London. Series B, Biological sciences · 1967
430 citations
Conformational Analysis of Macromolecules. III. Helical Structures of Polyglycine and Poly-L-Alanine
Roy A. Scott, Harold A. Scheraga · The Journal of Chemical Physics · 1966
424 citations