MaxQuant enables high peptide identification rates, individualized p.p.b.-range mass accuracies and proteome-wide protein quantification

Jürgen Cox, Matthias Mann

Nature Biotechnology

BiochemistryIdentification RatesNatural SciencesProteome-wide Protein QuantificationP.p.b.-range Mass Accuracies +8

Mass Spectrometric Sequencing of Proteins from Silver-Stained Polyacrylamide Gels

Andrej Shevchenko, Matthias Wilm, Ole Vorm, +1

Analytical Chemistry

Probability-based protein identification by searching sequence databases using mass spectrometry data

David N. Perkins, Darryl Pappin, David M. Creasy, +1

Electrophoresis

Large-scale analysis of the yeast proteome by multidimensional protein identification technology

Michael P. Washburn, Dirk Wolters, John R. Yates

Nature Biotechnology

Proteomic TechnologyFunctional GenomicsYeast ProteomeNatural SciencesMedicine +9

Stop and Go Extraction Tips for Matrix-Assisted Laser Desorption/Ionization, Nanoelectrospray, and LC/MS Sample Pretreatment in Proteomics

Juri Rappsilber, Yasushi Ishihama, Matthias Mann

Analytical Chemistry

Parts per Million Mass Accuracy on an Orbitrap Mass Spectrometer via Lock Mass Injection into a C-trap

Jesper V. Olsen, Lyris Martins Franco de Godoy, Guoqing Li, +7

Molecular & Cellular Proteomics

EngineeringLock Mass InjectionBiological Mass SpectrometrySpectrochemical AnalysisMillion Mass Accuracy +15

A method for the comprehensive proteomic analysis of membrane proteins

Christine C. Wu, Michael J. MacCoss, Kathryn E. Howell, +1

Nature Biotechnology

Proteomic TechnologyProteinlipid InteractionBiochemistryNatural SciencesMolecular Biology +4

Improved peptide identification in proteomics by two consecutive stages of mass spectrometric fragmentation

Jesper V. Olsen, Matthias Mann

Proceedings of the National Academy of Sciences

Stable Isotope Labeling by Amino Acids in Cell Culture (SILAC) and Proteome Quantitation of Mouse Embryonic Stem Cells to a Depth of 5,111 Proteins

Johannes Graumann, Nina C. Hubner, Jeong Beom Kim, +6

Molecular & Cellular Proteomics

Proteomic Mapping of Brain Plasma Membrane Proteins

Peter Aa. Nielsen, Jesper V. Olsen, Alexandre V. Podtelejnikov, +3

Molecular & Cellular Proteomics

Neurochemical BiomarkersMembrane ProteinsProtein PurificationProteomic TechnologyBioanalysis +14