Parasitology · 2006 · 31 citations · 19 references
Life SciencesBiologyZoologyParasite SystematicsParasite TaxonomyPhylogeneticsBayesian PhylogeneticsEvolutionary RelationshipsFreshwater SystematicsMaximum Likelihood PhylogeneticsPhylogenetic InferencePhylogenetic Tree ReconstructionBayesian Phylogenetic InferenceBayesian PhylogenyBayesian Tree ComparisonCombined Data PhylogeneticsCombined Evidence PhylogenyMaximum Likelihood InferenceModel-based Phylogenetic InferencePhylogenetic Model Comparison
The phylogenetic relationship of 5 genera, i.e. Diplozoon Nordmann, 1832, Paradiplozoon Achmerov, 1974, Inustiatus Khotenovsky, 1978, Sindiplozoon Khotenovsky, 1981, and Eudiplozoon Khotenovsky, 1985 in the subfamily Diplozoinae Palombi, 1949 (Monogenea, Polyopisthocotylea) was inferred from rDNA ITS-2 region using neighbour-joining (NJ), maximum likelihood (ML) and Bayesian methods. The phylogenetic trees produced by using NJ, ML and Bayesian methods exhibit essentially the same topology. Surprisingly, freshwater species of Paradiplozoon from Europe clustered together with species of Diplozoon, but separated from Chinese Paradiplozoon species. The results of molecular phylogeny and lower level of divergence (4.1-15.7%) in ITS-2 rDNA among Paradiplozoon from Europe and Diplozoon and, on the other hand, high level of divergence (45.3-53.7%) among Paradiplozoon species from Europe and China might indicate the non-monophyletic origin of the genus Paradiplozoon. Also, the generic status of European Paradiplozoon needs to be revised. The species of Paradiplozoon in China is a basal group in Diplozoinae as revealed by NJ and Bayesian methods, and Sindiplozoon appears to be closely related to European Paradiplozoon and Diplozoon with their relationship to Eudiplozoon and Inustiatus being unresolved.
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Molecular cloning: A laboratory manual
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MRBAYES: Bayesian inference of phylogenetic trees
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MODELTEST: testing the model of DNA substitution.
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PHYLIP-Phylogeny inference package (Version 3.2)
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