Phylogenetic characterization of Encephalitozoon romaleae (Microsporidia) from a grasshopper host: Relationship to Encephalitozoon spp. infecting humans

A Simple, Fast, and Accurate Algorithm to Estimate Large Phylogenies by Maximum Likelihood

Stéphane Guindon, Olivier Gascuel · Systematic Biology · 2003 · 17K citations · Full text

Life Sciences, Bioinformatics, Evolutionary Biology +17

A General Empirical Model of Protein Evolution Derived from Multiple Protein Families Using a Maximum-Likelihood Approach

Simon Whelan, Nick Goldman · Molecular Biology and Evolution · 2001 · 3K citations · Full text

Life Sciences, Bioinformatics, Evolutionary Biology +17

Assessment of methods for amino acid matrix selection and their use on empirical data shows that ad hoc assumptions for choice of matrix are not justified

Thomas Keane, Christopher J. Creevey, Melissa M. Pentony et al. · BMC Evolutionary Biology · 2006 · 1.1K citations · Full text

Life Sciences, Bioinformatics, Evolutionary Biology +16

Microsporidia are related to Fungi: Evidence from the largest subunit of RNA polymerase II and other proteins

Robert P. Hirt, John M. Logsdon, Bryan Healy et al. · Proceedings of the National Academy of Sciences · 1999 · 526 citations

Life Sciences, Evolutionary Biology, Molecular Biology +16

Evidence from Beta-Tubulin Phylogeny that Microsporidia Evolved from Within the Fungi

Patrick J. Keeling, Melissa A. Luker, Jeffrey D. Palmer · Molecular Biology and Evolution · 2000 · 306 citations · Full text

Life Sciences, Evolutionary Biology, Microbiology +15