Journal of Fish Biology · 2012 · 14 citations · 16 references
Life SciencesGeneticsZoologyIchthyologyMolecular EvolutionPhylogeneticsEvolutionary RelationshipsFreshwater Fish GeneticsFreshwater SystematicsMorphological PhylogeneticsPhylogenetic Comparative MethodsPhylogenomic AnalysisDifferentiationFish PhylogenyFreshwater Reptile PhylogenyGenetic Distance - Based GroupingIntraspecific DivergencePhylogenetic Hypothesis Testing
The phylogenetic relationship between two sympatric morphotypes of the Iran cave barb Iranocypris typhlops, and Garra rufa, was investigated by sequencing the cytochrome c oxidase I (coI) region (788 bp) providing the first molecular evidence of their phylogeny. Consistent with their morphological differences, the mean genetic distance between the two forms of I. typhlops was significantly higher than generally reported for intraspecific divergence in freshwater fishes. They were phylogenetically closer to G. rufa than to any other species.
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MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) Software Version 4.0
Koichiro Tamura, Joel T. Dudley, M Nei et al. · Molecular Biology and Evolution · 2007 · 28.8K citations · Full text
MRBAYES: Bayesian inference of phylogenetic trees
John P. Huelsenbeck, Fredrik Ronquist · Bioinformatics · 2001 · 22.2K citations · Full text