Concepedia

Molecular diversity of Chickpea chlorotic dwarf virus in Sudan: High rates of intra-species recombination – a driving force in the emergence of new strains

Simona Kraberger, Safaa G. Kumari, A. A. Hamed, Bruno Gronenborn, John E. Thomas, Murray Sharman, Gordon W. Harkins, Brejnev Muhire, Darren P. Martin, Arvind Varsani

Infection Genetics and Evolution · 2014 · 25 citations · 56 references

DOIFull text

Open access

Concepts

References

56

MUSCLE: multiple sequence alignment with high accuracy and high throughput

R. C. Edgar · Nucleic Acids Research · 2004 · 46.5K citations · Full text

, , +13

MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods

Koichiro Tamura, Daniel G. Peterson, Nora Peterson et al. · Molecular Biology and Evolution · 2011 · 40.3K citations · Full text

, , +17

New Algorithms and Methods to Estimate Maximum-Likelihood Phylogenies: Assessing the Performance of PhyML 3.0

Stéphane Guindon, Jean-François Dufayard, Vincent Lefort et al. · Systematic Biology · 2010 · 19K citations · Full text

, , +16

Mesquite: a modular system for evolutionary analysis. Version 2.6

Wayne P. Maddison, David R. Maddison · 2009 · 6.7K citations

, , +6

Detecting Individual Sites Subject to Episodic Diversifying Selection

Ben Murrell, Joel O. Wertheim, Sasha Moola et al. · PLoS Genetics · 2012 · 1.9K citations · Full text

, , +8