The Journal of Organic Chemistry · 2014 · 73 citations · 45 references
Nuclear PhysicsProton-coupled Electron TransferMagnetic ResonanceSpin-spin Coupling ConstantsComputational ChemistryChemistrySpectra-structure CorrelationIndividual ParametrizationRelativistic Force FieldH NmrBiophysicsPhysicsProton–proton Coupling ConstantsAtomic PhysicsMolecular MechanicQuantum ChemistryAb-initio MethodNatural SciencesProton TransferParametric ComputationsMedicineNuclear Magnetic Resonance Spectroscopy
Spin-spin coupling constants in (1)H NMR carry a wealth of structural information and offer a powerful tool for deciphering molecular structures. However, accurate ab initio or DFT calculations of spin-spin coupling constants have been very challenging and expensive. Scaling of (easy) Fermi contacts, fc, especially in the context of recent findings by Bally and Rablen (Bally, T.; Rablen, P. R. J. Org. Chem. 2011, 76, 4818), offers a framework for achieving practical evaluation of spin-spin coupling constants. We report a faster and more precise parametrization approach utilizing a new basis set for hydrogen atoms optimized in conjunction with (i) inexpensive B3LYP/6-31G(d) molecular geometries, (ii) inexpensive 4-31G basis set for carbon atoms in fc calculations, and (iii) individual parametrization for different atom types/hybridizations, not unlike a force field in molecular mechanics, but designed for the fc's. With the training set of 608 experimental constants we achieved rmsd <0.19 Hz. The methodology performs very well as we illustrate with a set of complex organic natural products, including strychnine (rmsd 0.19 Hz), morphine (rmsd 0.24 Hz), etc. This precision is achieved with much shorter computational times: accurate spin-spin coupling constants for the two conformers of strychnine were computed in parallel on two 16-core nodes of a Linux cluster within 10 min.
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Open Babel: An open chemical toolbox
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