Highly multiplexed and strand-specific single-cell RNA 5′ end sequencing

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

Ben Langmead, Cole Trapnell, Mihai Pop et al. · Genome biology · 2009 · 22.5K citations · Full text

Mapping and quantifying mammalian transcriptomes by RNA-Seq

A Mortazavi, Brian A. Williams, Kenneth McCue et al. · Nature Methods · 2008 · 14K citations

Functional Genomics, Genetics, Transcriptomics Technology +7

Stochastic Gene Expression in a Single Cell

Michael B. Elowitz, Arnold J. Levine, Eric D. Siggia et al. · Science · 2002 · 5.6K citations

Engineering, Gene Regulatory Network, Cellular Physiology +17

mRNA-Seq whole-transcriptome analysis of a single cell

Fuchou Tang, Cátálin Bárbácioru, Yangzhou Wang et al. · Nature Methods · 2009 · 3.9K citations

Single Cell Sequencing, Medicine, Single-cell Biology +9

The UCSC Genome Browser database: update 2011

Pauline A. Fujita, Brooke Rhead, Ann S. Zweig et al. · Nucleic Acids Research · 2010 · 1.9K citations · Full text