Quartet MaxCut: A fast algorithm for amalgamating quartet trees

The neighbor-joining method: a new method for reconstructing phylogenetic trees.

Naruya Saitou, M Nei · Molecular Biology and Evolution · 1987 · 60.5K citations · Full text

Life Sciences, Bioinformatics, Evolutionary Biology +17

MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) Software Version 4.0

Koichiro Tamura, Joel T. Dudley, M Nei et al. · Molecular Biology and Evolution · 2007 · 28.8K citations · Full text

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RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models

Alexandros Stamatakis · Bioinformatics · 2006 · 15.9K citations · Full text

Life Sciences, Bioinformatics, High-performance Computing +17

Evolutionary trees from DNA sequences: A maximum likelihood approach

Joseph Felsenstein · Journal of Molecular Evolution · 1981 · 14.9K citations

Life Sciences, Bioinformatics, Evolutionary Biology +14

Toward Defining the Course of Evolution: Minimum Change for a Specific Tree Topology

W. M. Fitch · Systematic Biology · 1971 · 6.5K citations

Life Sciences, Evolutionary Biology, Zoology +17