Journal of Chemical Information and Modeling · 2012 · 36 citations · 14 references
Natural SciencesChemistryPhysicsBiomolecular ModelingComputational ChemistryMolecular PhysicsAtomistic SimulationEnergy MinimizationForce FieldsMolecular MechanicsMolecular ModelingMolecular SimulationComputational Molecular ModelingMolecular Dynamics Force FieldsMolecular Mechanics Force FieldsMolecular Mechanics ModelingMolecular Simulation AlgorithmsVirtual Force Fields
We present the implementation of a new molecular mechanics program designed for use in mobile platforms, the first specifically built for these devices. The software is designed to run on Android operating systems and is compatible with several modern tablet-PCs and smartphones available in the market. It includes molecular viewer/builder capabilities with integrated routines for geometry optimizations and Monte Carlo simulations. These functionalities allow it to work as a stand-alone tool. We discuss some particular development aspects, as well as the overall feasibility of using computational chemistry software packages in mobile platforms. Benchmark calculations show that through efficient implementation techniques even hand-held devices can be used to simulate midsized systems using force fields.
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Helen M. Berman · Nucleic Acids Research · 2000 · 39.8K citations
N. Metropolis, Stanislaw M. Ulam · Journal of the American Statistical Association · 1949 · 6.1K citations
Updating quasi-Newton matrices with limited storage
Jorge Nocedal · Mathematics of Computation · 1980 · 2.7K citations · Full text