Physical Review Letters · 2008 · 53 citations · 18 references
Life SciencesNeuroscienceComputational NeuroscienceInformation TheorySystems NeuroscienceComputational ElectrophysiologyCortical NetworksNeural Circuit ModelingNeural Circuit OrganizationNeural CircuitsNeural NetworksComplex NetworksCortical Circuit ModelingElectrophysiological RecordingsGraph Theory AnalysisInformation Processing In Neural CircuitsInformation Processing In Neural NetworksInformation Theory In NeuroscienceInformation-theoretic Network Inference
We present a general information theoretic approach for identifying functional subgraphs in complex networks. We show that the uncertainty in a variable can be written as a sum of information quantities, where each term is generated by successively conditioning mutual informations on new measured variables in a way analogous to a discrete differential calculus. The analogy to a Taylor series suggests efficient optimization algorithms for determining the state of a target variable in terms of functional groups of other nodes. We apply this methodology to electrophysiological recordings of cortical neuronal networks grown in vitro. Each cell's firing is generally explained by the activity of a few neurons. We identify these neuronal subgraphs in terms of their redundant or synergetic character and reconstruct neuronal circuits that account for the state of target cells.
18
Network Motifs: Simple Building Blocks of Complex Networks
Ron Milo, Shai S. Shen-Orr, Shalev Itzkovitz et al. · Science · 2002 · 7.5K citations
Weak pairwise correlations imply strongly correlated network states in a neural population
Elad Schneidman, Michael J. Berry, Ronen Segev et al. · Nature · 2006 · 1.9K citations · Full text
Entropy and Information in Neural Spike Trains
Steven Strong, R. Köberle, Rob R. de Ruyter van Steveninck et al. · Physical Review Letters · 1998 · 999 citations