Fully automated shim mapping method for spectroscopic imaging of the mouse brain at 9.4 T

Abstract

For spectroscopic imaging studies of the mouse brain, it is critical to obtain optimal B(0) homogeneity over a large region of interest (ROI). In this paper, a fully automated shimming method for mouse brain at 9.4 T, based on B(0) mapping, is described. B(0) maps were obtained using a multislice gradient echo sequence with multiple phase evolution time delays with a novel unwrapping scheme. The unwrapping method allows phase maps with large bandwidths (+/-1 kHz) but with high resolution (0.3 Hz/ degrees ) to be acquired in a single acquisition, thereby minimizing the number of iterations required. The SD of the B(0) over the ROI (8 x 5 x 1 mm) was less than 10 Hz after shimming. Application of this method to the in vivo mouse brain allowed reproducible, high-quality spectroscopic data to be collected with 1-microl voxels.