Microbes and Environments · 2000 · 39 citations · 15 references
α SubdivisionJapanese Arable SoilBacterial PathogensMicrobial EvolutionPhylogenetic AnalysisJapanese Upland SoilPlant-rhizobia InteractionMicrobial EcologySoil MicrobiologyEnvironmental MicrobiologyEvolutionary MicrobiologySoil OrganismMicrobial DiversityMicrobiomeBiologyGram-negative BacteriologyMicrobial SystematicsNatural Sciences2,4-D-catabolizing Bacteria4-D Exposure.rd5-c2MicrobiologyMedicineMicrobial Genetics
We isolated the 2, 4-D-catabolizing bacterial strain RD5-C2 from Japanese upland soil that had no history of 2, 4-D exposure.RD5-C2 could use 2, 4-D as the sole carbon and energy sources for their growth.Phylogenetic analyses based on 16S rDNA sequencing revealed that RD5-C2 was a member of the BANA(Bradyrhizobium-Agromonas-Nitrobacter-Afipia)cluster in the α subdivision of the class Proteobacteria.The gene sequence of RD5-C2 most closely matched that of Bradyrhizobium sp.and also closely related to those of 2, 4-D-catabolizing α-Proteobacteria previously isolated from pristine environments of Hawaii, northern Canada and central Chile.This is the first instance that 2, 4-D-catabolizing bacteria in that phylogenetic group was isolated from an arable soil environment.
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16S ribosomal DNA amplification for phylogenetic study
W G Weisburg, Susan M. Barns, Dale A. Pelletier et al. · Journal of Bacteriology · 1991 · 11.6K citations · Full text
Biology, Ribosomal Dna Amplification, Microbial Systematics +15