Physical Chemistry Chemical Physics · 2010 · 58 citations · 43 references
Life SciencesBiochemistryBiophysicsMolecular BiophysicsProtein FoldingStructural BiologyBiomolecular InterfacesCarbohydrate-protein InteractionsMacromolecular AssemblyMacromolecular StructureProtein DynamicsProtein StructureAqueous SolvationProtein - Water InteractionsProtein Self-assemblyProtein-sugar InteractionsProtein-surface InteractionsSolvation In Biomolecular SimulationsSolvent Effects On FoldingSurface Properties Of Proteins
To help understand how sugar interactions with proteins stabilise biomolecular structures, we compare the three main hypotheses for the phenomenon with the results of long molecular dynamics simulations on lysozyme in aqueous trehalose solution (0.75 M). We show that the water replacement and water entrapment hypotheses need not be mutually exclusive, because the trehalose molecules assemble in distinctive clusters on the surface of the protein. The flexibility of the protein backbone is reduced under the sugar patches supporting earlier findings that link reduced flexibility of the protein with its higher stability. The results explain the apparent contradiction between different experimental and theoretical results for trehalose effects on proteins.
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Molecular dynamics with coupling to an external bath
Herman J. C. Berendsen, Johan P. M. Postma, Wilfred F. van Gunsteren et al. · The Journal of Chemical Physics · 1984 · 31K citations · Full text
Natural Sciences, Chemistry, Physics +17
Structure of Hen Egg-White Lysozyme: A Three-dimensional Fourier Synthesis at 2 Å Resolution
C. C. F. Blake, D. F. Koenig, G. A. Mair et al. · Nature · 1965 · 1.7K citations
Preservation of Membranes in Anhydrobiotic Organisms: The Role of Trehalose
John H. Crowe, Lois M. Crowe, D. Chapman · Science · 1984 · 1.5K citations