Concepedia

Mapping Conformational Ensembles of Aβ Oligomers in Molecular Dynamics Simulations

Seong-Won Kim, Takako Takeda, Dmitri K. Klimov

Biophysical Journal · 2010 · 42 citations · 43 references

DOIFull text

Open access

Concepts

References

43

UCSF Chimera—A visualization system for exploratory research and analysis

Eric F. Pettersen, Thomas D. Goddard, Conrad C. Huang et al. · Journal of Computational Chemistry · 2004 · 47.8K citations

, , +17

Dictionary of protein secondary structure: Pattern recognition of hydrogen‐bonded and geometrical features

Wolfgang Kabsch, Christian Sander · Biopolymers · 1983 · 15.7K citations · Full text

, , +17

<scp>CHARMM</scp>: A program for macromolecular energy, minimization, and dynamics calculations

Bernard R. Brooks, Robert E. Bruccoleri, Barry D. Olafson et al. · Journal of Computational Chemistry · 1983 · 14.9K citations

, , +13

Replica-exchange molecular dynamics method for protein folding

Yuji Sugita, Yuko Okamoto · Chemical Physics Letters · 1999 · 4.6K citations

, , +13

Common Structure of Soluble Amyloid Oligomers Implies Common Mechanism of Pathogenesis

Rakez Kayed, Elizabeth Head, Jennifer L. Thompson et al. · Science · 2003 · 4.1K citations

, , +17