Humana Press eBooks · 2004 · 1.4K citations · 46 references
Natural SciencesChemistryComputational ChemistrySpectroscopyStructural BiologyMacromolecular Structure DeterminationMagnetic Resonance SpectroscopyProtein StructureStructural ElucidationStructure DeterminationFour-dimensional Nmr SpectroscopyMultidimensional Nmr SpectroscopyMultidimensional Nuclear Magnetic Resonance SpectroscopyNuclear Magnetic Resonance AnalysisNuclear Magnetic Resonance Data AnalysisNuclear Magnetic Resonance Structure DeterminationNuclear Overhauser Effect SpectroscopyThree-dimensional Nmr Spectroscopy
This chapter gives an introduction to automated nuclear magnetic resonance (NMR) structure calculation with the program CYANA. Given a sufficiently complete list of assigned chemical shifts and one or several lists of cross-peak positions and columns from two-, three-, or four-dimensional nuclear Overhauser effect spectroscopy (NOESY) spectra, the assignment of the NOESY cross-peaks and the three-dimensional structure of the protein in solution can be calculated automatically with CYANA.
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Optimization by Simulated Annealing
Scott Kirkpatrick, C. D. Gelatt, M.P. Vecchi · Science · 1983 · 44.6K citations
Molecular dynamics with coupling to an external bath
Herman J. C. Berendsen, Johan P. M. Postma, Wilfred F. van Gunsteren et al. · The Journal of Chemical Physics · 1984 · 31K citations · Full text
Natural Sciences, Chemistry, Physics +17
Relaxation Processes in a System of Two Spins
I. Solomon · Physical Review · 1955 · 3.3K citations