The Journal of Physical Chemistry · 1981 · 14 citations · 0 references
Natural SciencesChemistryPhysicsNucleic Acid BiochemistryNucleic Acid ChemistryQuantum ChemistryDna ChemistryDna StructureMolecular Excited StatesMolecular Orbital TheoryNucleic Acid ModelingNucleic Acid StructureDna Base PairingDna ThermodynamicsDouble-stranded Dna StructureEquilibriumExcited Electronic StatesHydrogen Bonding In Base PairsNucleic Acid Base PairingPotential Energy Curves
The excited states of the double hydrogen bond in the adenine-thymine nucleotide base pair has been investigated in the semiempirical CNDO/S-CI approximation. Double-minimum potential curves are obtained for several nuclear configurations characterizing simultaneous tautomeric rearrangements of the NH⋯N and O⋯HN bonds. The energy profiles for the coupled movement of the hydrogen bonding show that the Watson-Crick configuration of the adenine-thymine base pair is the most stable for all of the excited states studied. Estimates are made within the WKB approximation of the tunneling rate and tunneling probability. The results indicate that increasing the energy of the excited states would increase the probability of double protonic transfer by tunnel effect and thus for irreversible mutation. A comparison of the composition of the potentials for the single movement of the protons with the double-minimum potential of the concerted movement shows that the potential is nonseparable. The shortcomings that follow from the WKB approximation as applied to the present problem are discussed. © 1981 American Chemical Society.