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Functional MRI statistical software packages: A comparative analysis

Sherri Gold, Brad T. Christian, Stephan Arndt, Gene Zeien, Ted Cizadlo, Debra Johnson, Michael Flaum, Nancy C. Andreasen

Human Brain Mapping · 1998 · 147 citations · 33 references

DOI Full text

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TL;DR

Many fMRI analysis software packages exist, each offering diverse options, so understanding their features is essential. The study compared several packages on documentation, ease of use, input requirements, statistical methods, and output options. The authors evaluated the functionality of AFNI 2.01, SPM96, Stimulate 5.0, MEDIMAX 2.01, and FIT, while also describing but not testing FIASCO, Yale, and MEDx 2.0. Published in Brain Mapping 6:73–84 (1998) © 1998 Wiley‑Liss, Inc.

Abstract

Currently, there are many choices of software packages for the analysis of fMRI data, each offering many options. Since no one package can meet the needs of all fMRI laboratories, it is helpful to know what each package offers. Several software programs were evaluated for comparison of their documentation, ease of learning and use, referencing, data input steps required, types of statistical methods offered, and output choices. The functionality of each package was detailed and discussed. AFNI 2.01, SPM96, Stimulate 5.0, MEDIMAX 2.01, and FIT were tested. FIASCO, Yale, and MEDx 2.0 were described but not tested. A description of each package is provided. Hum. Brain Mapping 6:73–84, 1998. © 1998 Wiley-Liss, Inc.