Physical Review Letters · 2003 · 261 citations · 12 references
Life SciencesBiologyCell BiologyComputational BiologyComputational Systems BiologyNetwork BiologyGene Expression DynamicsMathematical BiologyBiochemical Reaction NetworksCellular Network ArchitectureChemical Abundance AnalysisChemical Abundance ModelingGene Network DynamicsHuman Embryonic Stem CellsPower Distribution
Using data from gene expression databases on various organisms and tissues, including yeast, nematodes, human normal and cancer tissues, and embryonic stem cells, we found that the abundances of expressed genes exhibit a power-law distribution with an exponent close to -1; i.e., they obey Zipf's law. Furthermore, by simulations of a simple model with an intracellular reaction network, we found that Zipf's law of chemical abundance is a universal feature of cells where such a network optimizes the efficiency and faithfulness of self-reproduction. These findings provide novel insights into the nature of the organization of reaction dynamics in living cells.
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Lethality and centrality in protein networks
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A comprehensive analysis of protein–protein interactions in Saccharomyces cerevisiae
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Life Sciences, Biochemistry, Biology +14
Serial Analysis of Gene Expression
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