Journal of Bacteriology · 2003 · 150 citations · 31 references
Life SciencesMicrobiologyMolecular BiologyEnzymologyProtein BiochemistryProtein TranslationBacterial Secretion SystemsMembrane ProteinsProtein Sequence AnalysisProtein StructureProtein SynthesisProteolytic ProcessingDirected MutagenesisEnzymesEscherichia ColiIntegral Membrane ProteinsPeptidase ActivityProtein Secretion Across The Cell EnvelopeSignal Peptide MotifSubstrate Binding Specificity
A large number of secretory proteins in the thermoacidophile Sulfolobus solfataricus are synthesized as a precursor with an unusual leader peptide that resembles bacterial type IV prepilin signal sequences. This set of proteins includes the flagellin subunit but also various solute binding proteins. Here we describe the identification of the S. solfataricus homolog of bacterial type IV prepilin peptidases, termed PibD. PibD is an integral membrane protein that is phylogenetically related to the bacterial enzymes. When heterologously expressed in Escherichia coli, PibD is capable of processing both the flagellin and glucose-binding protein (GlcS) precursors. Site-directed mutagenesis of the GlcS signal peptide shows that the substrate specificity of PibD is consistent with the variations found in proteins with type IV prepilin-like signal sequences of S. solfataricus. We conclude that PibD is responsible for the processing of these secretory proteins in S. solfataricus.
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Multiple sequence alignment with hierarchical clustering
F. Corpet · Nucleic Acids Research · 1988 · 5.4K citations · Full text
Complete Genome Sequence of the Methanogenic Archaeon, <b> <i>Methanococcus jannaschii</i> </b>
Carol J. Bult, Owen White, Gary J. Olsen et al. · Science · 1996 · 2.1K citations