Nature · 2015 · 1.3K citations · 77 references
Life SciencesBiologyMicrobiologyComparative GenomicsMicrobial GeneticsMicrobial GenomicsArchaeal EvolutionArchaeal GeneticsArchaeal SystematicsMicrobial PhylogeneticsMicrobial PhylogenyMolecular PhylogenyArchaeal Comparative GenomicsArchaeal Genome OrganizationArchaeal Phylogeny
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Trimmomatic: a flexible trimmer for Illumina sequence data
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Fast and accurate short read alignment with Burrows–Wheeler transform
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