Crop and Pasture Science · 2015 · 16 citations · 43 references
AgricultureCrop SciencesPlant SciencesField PhenotypingPlant GeneticsQuantitative GeneticsAgronomic Trait EvaluationCrop PhenotypingNutritional Trait AssessmentQuantitative Trait LociBroad-sense HeritabilityGenetic Marker AssociationItalian RyegrassMarker-trait Association AnalysisPhenotypic TraitsPhenotypic Variance ComponentsSingle-nucleotide Polymorphism AnalysisSingle-nucleotide Polymorphism Variation
Italian ryegrass (Lolium multiflorum Lam.) is one of the most important temperate forage grasses on a global basis. The present study estimated trait variance, inter-trait correlation and broad-sense heritability (H2) for herbage yield, nutritive values and morphological characteristics of Italian ryegrass, and analysed associations between these traits and single nucleotide polymorphism (SNP) markers. A field-based, spaced-plant nursery experiment was conducted to assess 960 genotypes from seven cultivars and breeding lines, in a randomised complete block design with four replicates. Significant correlations, broad ranges of variation and significant genotypic variance components were identified for 18 measured phenotypic traits. Moderate H2 estimates (0.36–0.52) were obtained for nutritive values, compared with low to high H2 estimates (0.20–0.69) for yield over five cuttings, and moderate to high H2 estimates (0.40–0.78) for morphological traits. Within- and among-cultivar variation ranged from 40.0% to 95.1% and 4.9% to 60.0%, respectively, depending on different traits. Association analysis identified 65 significant SNP–trait gene associations involving multiple genomic regions, which warrant further validation. The implications of trait correlation and heritability for selection and improvement are discussed.
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Inference of Population Structure Using Multilocus Genotype Data
Jonathan K. Pritchard, Matthew Stephens, Peter Donnelly · Genetics · 2000 · 34.3K citations · Full text
TASSEL: software for association mapping of complex traits in diverse samples
Peter J. Bradbury, Zhiwu Zhang, Dallas E. Kroon et al. · Bioinformatics · 2007 · 8.3K citations · Full text
L. A. Miller, J. M. Moorby, David R. Davies et al. · Grass and Forage Science · 2001 · 354 citations · Full text