Molecular Ecology Notes · 2006 · 93 citations · 7 references
Life SciencesGeneticsMolecular GeneticsGenomicsMedical GeneticsParasite EpidemiologyMalariaMolecular MarkersMolecular TypingPolymerase Chain ReactionMalaria ParasitesMicrosatellite AnalysisMicrosatellite Marker AnalysisMicrosatellite MarkersMicrosatellite VariationPlasmodium FalciparumPlasmodium VivaxPolymerase Chain Reaction (Pcr) Amplification
Abstract We have optimized a set of 14 polymorphic microsatellite markers for the human malaria parasite Plasmodium vivax , all of them consisting of either tri‐ or tetranucleotide repeats. These markers, whose polymerase chain reaction amplification conditions are identical, were used to screen 25 parasite isolates from malaria‐endemic areas in Sri Lanka. The total number of alleles per locus ranged between 6 and 13 (average, 7.8), and expected heterozygosity ranged from 0.627 to 0.913 (average, 0.790). These markers are now being used to characterize the population structure of P. vivax in other endemic areas.
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Tandem repeats finder: a program to analyze DNA sequences
Gary Benson · Nucleic Acids Research · 1999 · 9.9K citations