Distinct and predictive chromatin signatures of transcriptional promoters and enhancers in the human genome

Nathaniel D. Heintzman, Rhona Stuart, Gary C. Hon, +12

Nature Genetics

Histone ModificationsChromatinTranscriptional RegulationTranscriptional PromotersChromatin Structure +12

An integrated semiconductor device enabling non-optical genome sequencing

Jonathan M. Rothberg, Wolfgang Hinz, Todd M. Rearick, +41

Nature

Assessing computational tools for the discovery of transcription factor binding sites

Martin Tompa, Nan Li, Timothy L. Bailey, +22

Nature Biotechnology

BioinformaticsSequence MotifComputational ToolsTranscriptional RegulationNatural Sciences +11

A Global Map of p53 Transcription-Factor Binding Sites in the Human Genome

Chia‐Lin Wei, Qiang Wu, Vinsensius B. Vega, +19

Cell

ChromatinTranscriptional RegulationFunctional GenomicsNatural SciencesMolecular Biology +8

A map of human genome variation from population-scale sequencing

Richard Durbin, David L. Altshuler, Gonçalo R. Abecasis, +358

HAL (Le Centre pour la Communication Scientifique Directe)

Global mapping of c-Myc binding sites and target gene networks in human B cells

Karen Zeller, Xiaodong Zhao, Charlie W. H. Lee, +14

Proceedings of the National Academy of Sciences

ImmunologyMolecular BiologyDirect MycGene Regulatory NetworkTumor Biology +19

Sequence and structural variation in a human genome uncovered by short-read, massively parallel ligation sequencing using two-base encoding

Kevin McKernan, Heather E. Peckham, Gina L. Costa, +42

Genome Research

The Insulator Binding Protein CTCF Positions 20 Nucleosomes around Its Binding Sites across the Human Genome

Yutao Fu, Manisha Sinha, Craig L. Peterson, +1

PLoS Genetics

Nucleosome positioning signals in genomic DNA

Heather E. Peckham, Robert E. Thurman, Yutao Fu, +4

Genome Research

Identification and Characterization of Cell Type–Specific and Ubiquitous Chromatin Regulatory Structures in the Human Genome

Hualin Simon Xi, Hennady P. Shulha, Jane M. Lin, +10

PLoS Genetics

Epigenetic ChangeGeneticsEpigeneticsDnasei HsTranscriptional Regulation +20