Mustafa Simmons

Validating the AMRFinder Tool and Resistance Gene Database by Using Antimicrobial Resistance Genotype-Phenotype Correlations in a Collection of Isolates

Michael Feldgarden, Vyacheslav Brover, Daniel H. Haft et al. · Antimicrobial Agents and Chemotherapy · 2019 · 1.3K citations · Full text

Implementation of Nationwide Real-time Whole-genome Sequencing to Enhance Listeriosis Outbreak Detection and Investigation

Brendan R. Jackson, Cheryl L. Tarr, Errol Strain et al. · Clinical Infectious Diseases · 2016 · 364 citations · Full text

Antimicrobial Resistance Genes, Cassettes, and Plasmids Present in Salmonella enterica Associated With United States Food Animals

Elizabeth A. McMillan, Sushim K. Gupta, Laura E. Williams et al. · Frontiers in Microbiology · 2019 · 145 citations · Full text

Using the NCBI AMRFinder Tool to Determine Antimicrobial Resistance Genotype-Phenotype Correlations Within a Collection of NARMS Isolates

Michael Feldgarden, Vyacheslav Brover, Daniel H. Haft et al. · 2019 · 77 citations · Full text

Molecular Epidemiology, Escherichia Coli, Resistance Gene Content +21

Benchmark datasets for phylogenomic pipeline validation, applications for foodborne pathogen surveillance

Ruth Timme, Hugh Rand, Martin Shumway et al. · PeerJ · 2017 · 64 citations · Full text