Doug Wendel

The Biological Observation Matrix (BIOM) format or: how I learned to stop worrying and love the ome-ome

Daniel McDonald, José C. Clemente, Justin Kuczynski et al. · GigaScience · 2012 · 952 citations · Full text

Life Sciences, Bioinformatics, Biomedical Informatics +13

American Gut: an Open Platform for Citizen Science Microbiome Research

Daniel McDonald, Embriette R. Hyde, Justine W. Debelius et al. · mSystems · 2018 · 906 citations · Full text

Life Sciences, Microbiology, Metabolomics +16

Minimum information about a marker gene sequence (MIMARKS) and minimum information about any (x) sequence (MIxS) specifications

Pelin Yilmaz, Renzo Kottmann, Dawn Field et al. · Nature Biotechnology · 2011 · 809 citations

Life Sciences, Genetics, Molecular Genetics +10

MIxS-BE: a MIxS extension defining a minimum information standard for sequence data from the built environment

Elizabeth M. Glass, Yekaterina Dribinsky, Pelin Yilmaz et al. · The ISME Journal · 2013 · 121 citations · Full text

Computing, Computer Science, Data Management +11

TopiaryExplorer: visualizing large phylogenetic trees with environmental metadata

Meg Pirrung, Ryan Kennedy, J. Gregory Caporaso et al. · Bioinformatics · 2011 · 17 citations · Full text

Life Sciences, Bioinformatics, Ecology +17