CellMarker: a manually curated resource of cell markers in human and mouse

Xinxin Zhang, Yujia Lan, Jinyuan Xu, +14

Nucleic Acids Research

ImmunologyPathologyMultiomicsSubstantial Cell MarkersTumor Biology +19

CancerSEA: a cancer single-cell state atlas

Huating Yuan, Min Yan, Guanxiong Zhang, +11

Nucleic Acids Research

BioinformaticsFunctional GenomicsTumor HeterogeneityHigh Functional HeterogeneityMedicine +11

TIP: A Web Server for Resolving Tumor Immunophenotype Profiling

Liwen Xu, Chunyu Deng, Bo Pang, +11

Cancer Research

DiseaseEnhancer: a resource of human disease-associated enhancer catalog

Guanxiong Zhang, Jian Shi, Shiwei Zhu, +8

Nucleic Acids Research

EngineeringDisease EtiologyGeneticsDatabasesGenetic Epidemiology +18

Single-Cell Transcriptomic Analysis Reveals a Tumor-Reactive T Cell Signature Associated With Clinical Outcome and Immunotherapy Response In Melanoma

Min Yan, Jing Hu, Yanyan Ping, +8

Frontiers in Immunology

T-regulatory CellImmunologyPathologySingle-cell Transcriptomic AnalysisT Cells +17

A pan‐cancer atlas of cancer hallmark‐associated candidate driver lnc<scp>RNA</scp>s

Yulan Deng, Shangyi Luo, Xinxin Zhang, +10

Molecular Oncology

Substantial Cancer GenomePathologyCancer BiologyTumor BiologyCandidate Driver Lncrnas +14

Dynamic regulatory networks of T cell trajectory dissect transcriptional control of T cell state transition

Min Yan, Jing Hu, Huating Yuan, +9

Molecular Therapy — Nucleic Acids

Identifying Cancer Driver lncRNAs Bridged by Functional Effectors through Integrating Multi-omics Data in Human Cancers

Yong Zhang, Gaoming Liao, Jing Bai, +9

Molecular Therapy — Nucleic Acids

EngineeringGeneticsFunctional EffectorsTumor BiologyMulti-omics Data +20

Capturing functional long non-coding RNAs through integrating large-scale causal relations from gene perturbation experiments

Jinyuan Xu, Aiai Shi, Zhilin Long, +9

EBioMedicine

Combined homologous recombination repair deficiency and immune activation analysis for predicting intensified responses of anthracycline, cyclophosphamide and taxane chemotherapy in triple-negative breast cancer

Gaoming Liao, Z. X. Jiang, Yiran Yang, +9

BMC Medicine